CDS

Accession Number TCMCG042C56243
gbkey CDS
Protein Id XP_016488379.1
Location join(33446..33691,35194..35313,35480..35608,35703..35765,36643..36750,37336..37413,38106..38198,38313..38399,38707..38808,38968..39087,39201..39263,39485..39618,39777..39858,39954..40012,40116..40161,40564..40655,40746..40815,40929..41000)
Gene LOC107808380
GeneID 107808380
Organism Nicotiana tabacum

Protein

Length 587aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016632893.1
Definition PREDICTED: splicing factor 3B subunit 2-like [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description proline-rich domain in spliceosome associated proteins
KEGG_TC -
KEGG_Module M00352        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12829        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0005686        [VIEW IN EMBL-EBI]
GO:0005689        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0030532        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071011        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097525        [VIEW IN EMBL-EBI]
GO:0120114        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCGGTGGAAGTATCAAATAGAGTAGCTGAAACTCTTGGCTATCCAAACGGCGATTTGAGACCTCAAAACCCTAACGCCGCCTCTAAGAAATCGAAGGAAAGCGAGCGGCGCCGTAGGCGGCGGAAGCAGAAGAAGAACAAGGTGGCTTCTCAGGTCGCCAATGGAGAAGACAGTGATAACGCTGCCGGAGACGCAAATGGCGGCGCTGAGAATAGTGCTAAGGAAAATTCCGATCCTCAGAAGTCTTTGGAGCAAGTTGAAGTGGAGTATGTACCAGAGAAGGCTGAACTAGATGGTGAGTTCGATGAGGAATTCAGGAAGGTCTTTGAGAGATTTACTTTCACGGATGCTGCTGGTTCCGAGGAGAATGAAAAAAAGGACGAAACTGCTGTGGATGGATCCTCCAAGAAAAAGGCTGATTCTGATTCTGAGGACGACGAACAGGATGACGCACAGCTAAAGGAGAAGGGCATCTCTAACAAAAAGAAAAAACTTCAGCGTAGGATGAAGATTGCAGAACTGAAGCAAATCTCTATGAAGCCTGATGTTGTTGAGGTGTGGGATGCTACTGCAGCAGATCCTAAGCTTTTGGTGTTTCTGAAATCTTACCGAAATACTGTTCCTGTTCCAAGGCACTGGTGTCAGAAACGGAAATTTTTGCAGGGGAAGCGTGGAATTGAGAAACAACCATTTCAACTTCCTGACTTTATAGCTGCAACAGGAATTGAGAAAATTAGACAAGCTTATATTGAAAAGGAGGACAGTAAGAAGCTTAAACAAAAGCAGCGGGAAAGGATGCAGCCAAAAATGGGGAAGATGGATATCGATTATCAGGTTCTCCATGATGCCTTTTTTAAGTATCAGACTAAACCGAAGTTGACACATCATGGCGATCTGTATTATGAAGGGAAGGAGTTTGAGGTCAAGTTGAGGGAAATGAAACCTGGAATGTTGTCTCATGAACTGAAAGAGGCCCTTGGTATGCCTGAAGGTTCTCCTCCTCCTTGGCTCATCAATATGCAGAGATACGGTCCTCCACCCTCTTATCCTCAGCTGAAAATCCCTGGACTCAATGCTCCTATTCCACCAGGAGCCAAGTTTGGCTATCAGCCGGGAGGTTGGGGTAAACCACCTGTTGATGAATACGGACGCCCTTTATACGGAGATGTATTTGGTGTGTTGCAACAAGACCAGCCTAATTATGAGGATGAACCTGTTGACAAGACTAAGCATTGGGGTGACTTGGAGGAAGAGGAAGAAGAGGAGGAAGAAGAAGAGGAAGAAGAGATGGAGGAAGAGGAGCTGGAGGATGGTATTCAGTCAGTGGACAGCCTTTCAAGTACTCCTACTGGAGTTGAGACTCCTGATGTTATTGATCTTCGCAAGCAGCAGAGGAAGGAGCCCGAGAAGCCCCTCTACCAGGTGCTTGAAGAAAAAGAAGAAAAGATAGCTCCTGGAACGCTTCTTGGAACAACCCATACGTATGTGATCAACACTGGTACTCAAGACAAGACTGGTGCCAAAAGGGTTGATCTGCTCAAAGGTCAGAAGTCAGATAGAGTTGATGTCACATTGGCACCTGAAGAGTTGGAACTCATGGACAATGTCTTACCCGCCAAATATGAGGAAGCTAGAGAGGAAGAGAAGCTTCGTAGCCAGCGTGAGGATTTCAGTGACATGGTAGCAGAGAATGAGAAGAAGAGGAAACGTAAAATGCAGGAAAAGGAAGGCAAGTCCAAAAAGAAGGATTTCAAGTTTTGA
Protein:  
MPVEVSNRVAETLGYPNGDLRPQNPNAASKKSKESERRRRRRKQKKNKVASQVANGEDSDNAAGDANGGAENSAKENSDPQKSLEQVEVEYVPEKAELDGEFDEEFRKVFERFTFTDAAGSEENEKKDETAVDGSSKKKADSDSEDDEQDDAQLKEKGISNKKKKLQRRMKIAELKQISMKPDVVEVWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGKMDIDYQVLHDAFFKYQTKPKLTHHGDLYYEGKEFEVKLREMKPGMLSHELKEALGMPEGSPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGAKFGYQPGGWGKPPVDEYGRPLYGDVFGVLQQDQPNYEDEPVDKTKHWGDLEEEEEEEEEEEEEEMEEEELEDGIQSVDSLSSTPTGVETPDVIDLRKQQRKEPEKPLYQVLEEKEEKIAPGTLLGTTHTYVINTGTQDKTGAKRVDLLKGQKSDRVDVTLAPEELELMDNVLPAKYEEAREEEKLRSQREDFSDMVAENEKKRKRKMQEKEGKSKKKDFKF